STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgkPhosphoglycerate kinase; evidence=ISS; db_xref=cjejuni:Cj1402c; date=20070321; method=automatic:reciprocal fasta; Belongs to the phosphoglycerate kinase family. (401 aa)    
Predicted Functional Partners:
gapA
Glyceraldehyde 3-phosphate dehydrogenase; evidence=ISS; db_xref=cjejuni:Cj1403c; date=20070321; method=automatic:reciprocal fasta; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 0.997
tpiA
Putative triosephosphate isomerase; evidence=ISS; db_xref=cjejuni:Cj1401c; date=20070321; method=automatic:reciprocal fasta.
 
 0.996
gap
Glyceraldehyde 3-phosphate dehydrogenase; evidence=ISS; db_xref=cdiphtheriae:DIP1310; date=20070321; method=automatic:reciprocal fasta; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.995
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
 
 
 0.987
pgm
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
 0.983
fba
Putative fructose-1,6-bisphosphate aldolase, Fba; evidence=IEA; db_xref=cbotulinum:CBO0193; date=20070321; method=automatic:reciprocal fasta.
  
 
 0.930
pgi1
Glucose-6-phosphate isomerase; evidence=ISS; db_xref=nmeningitidis_serogroupC_strainFAM18:NMC1326; date=20070321; method=automatic:reciprocal fasta; Belongs to the GPI family.
  
 
 0.917
corA
Magnesium and cobalt transport protein; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.813
HMU07340
Putative membrane protein; evidence=ISS; db_xref=smarcescens:SMA3219; date=20070321; method=automatic:reciprocal fasta.
       0.810
tkt
Transketolase; evidence=ISS; db_xref=cjejuni:Cj1645; date=20070321; method=automatic:reciprocal fasta; Belongs to the transketolase family.
  
 
 0.693
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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