STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgkPhosphoglycerate kinase; evidence=ISS; db_xref=cjejuni:Cj1402c; date=20070321; method=automatic:reciprocal fasta; Belongs to the phosphoglycerate kinase family. (401 aa)    
Predicted Functional Partners:
gapA
Glyceraldehyde 3-phosphate dehydrogenase; evidence=ISS; db_xref=cjejuni:Cj1403c; date=20070321; method=automatic:reciprocal fasta; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.998
tpiA
Putative triosephosphate isomerase; evidence=ISS; db_xref=cjejuni:Cj1401c; date=20070321; method=automatic:reciprocal fasta.
 
 0.997
gap
Glyceraldehyde 3-phosphate dehydrogenase; evidence=ISS; db_xref=cdiphtheriae:DIP1310; date=20070321; method=automatic:reciprocal fasta; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 0.996
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
 
 
 0.985
pgm
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
 0.970
fba
Putative fructose-1,6-bisphosphate aldolase, Fba; evidence=IEA; db_xref=cbotulinum:CBO0193; date=20070321; method=automatic:reciprocal fasta.
  
 
 0.938
pgi1
Glucose-6-phosphate isomerase; evidence=ISS; db_xref=nmeningitidis_serogroupC_strainFAM18:NMC1326; date=20070321; method=automatic:reciprocal fasta; Belongs to the GPI family.
  
 
 0.925
ppc
Putative phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
  
 
 0.877
atpD
ATP synthase F1 sector beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
  
 
 0.816
corA
Magnesium and cobalt transport protein; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.814
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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