STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgmPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (490 aa)    
Predicted Functional Partners:
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 0.991
pgk
Phosphoglycerate kinase; evidence=ISS; db_xref=cjejuni:Cj1402c; date=20070321; method=automatic:reciprocal fasta; Belongs to the phosphoglycerate kinase family.
  
 
 0.983
HMU01550
D-3-phosphoglycerate dehydrogenase; evidence=ISS; db_xref=saureusMSSA476:SAS1650; date=20070321; method=automatic:reciprocal fasta; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.905
pgi1
Glucose-6-phosphate isomerase; evidence=ISS; db_xref=nmeningitidis_serogroupC_strainFAM18:NMC1326; date=20070321; method=automatic:reciprocal fasta; Belongs to the GPI family.
  
 
 0.887
fba
Putative fructose-1,6-bisphosphate aldolase, Fba; evidence=IEA; db_xref=cbotulinum:CBO0193; date=20070321; method=automatic:reciprocal fasta.
   
 
 0.866
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
    
 0.862
tkt
Transketolase; evidence=ISS; db_xref=cjejuni:Cj1645; date=20070321; method=automatic:reciprocal fasta; Belongs to the transketolase family.
   
 
 0.856
zwf
Glucose 6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
   
 
 0.833
tpiA
Putative triosephosphate isomerase; evidence=ISS; db_xref=cjejuni:Cj1401c; date=20070321; method=automatic:reciprocal fasta.
  
 
 0.833
eda
7 KHG/KDPG aldolase; Unknown EC_number=; ; evidence=ISS; db_xref=styphimuriumDT104:SDT1895; date=20070321; method=automatic:reciprocal fasta.
   
 
  0.802
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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