STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cznCPutative Cadmium-zinc-nickel outer membrane efflux protein, CznC; 16790756; ; evidence=ISS. (424 aa)    
Predicted Functional Partners:
cznB
Putative Cadmium-zinc-nickel resistance protein, CznB; 16790756; ; evidence=ISS.
  
 
 0.920
cznA
Putative Cadmium-zinc-nickel resistance protein, cznA; 16790756; ; evidence=ISS; db_xref=bcenocepacia:CAM0713; date=20070321; method=automatic:reciprocal fasta; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 0.900
HMU07660
Putative hypothetical protein; evidence=ISS.
       0.813
HMU13710
Putative membrane protein; evidence=ISS; db_xref=ecarotovora_atroseptica:ECA0424; date=20070321; method=automatic:top fasta hit.
  
 
 0.678
glyS
glycyl-tRNA synthetase beta chain; evidence=ISS; db_xref=cjejuni:Cj1234; date=20070321; method=automatic:reciprocal fasta.
       0.531
HMU07610
Putative hypothetical protein; evidence=ISS.
       0.446
crdB
Putative copper resistance determinant, CrdB; 12426358; ; evidence=ISS.
      
 0.412
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.