STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HMU07730Putative Na+/H+ Antiporter; evidence=ISS; db_xref=cjejuni:Cj1684c; date=20070321; method=automatic:reciprocal fasta. (394 aa)    
Predicted Functional Partners:
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.799
HMU05080
Putative hypothetical protein; evidence=ISS; db_xref=cjejuni:Cj1009c; date=20070321; method=automatic:reciprocal fasta.
 
     0.662
HMU05250
Putative hypothetical protein; evidence=ISS; db_xref=cjejuni:Cj0881c; date=20070321; method=automatic:reciprocal fasta.
 
     0.564
HMU10570
Putative predicted ATPase; evidence=ISS.
 
     0.563
HMU07710
Putative ankyrin-repeat containing protein; evidence=ISS; db_xref=cjejuni:Cj1386; date=20070321; method=automatic:top fasta hit.
       0.561
HMU11660
Putative hypothetical protein; evidence=ISS; db_xref=cjejuni:Cj1495c; date=20070321; method=automatic:reciprocal fasta.
  
     0.504
HMU09640
Putative integral membrane protein; evidence=ISS; db_xref=cjejuni:Cj0232c; date=20070321; method=automatic:top fasta hit.
  
     0.485
dapD
Possible 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
       0.468
HMU07750
Putative Sel1 repeat domain protein; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives.
       0.468
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.451
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.