STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
HMU07790Putative hypothetical protein; evidence=ISS. (277 aa)    
Predicted Functional Partners:
HMU02370
Putative aminotransferase (degT family); evidence=ISS; db_xref=cjejuni:Cj1294; date=20070321; method=automatic:reciprocal fasta; Belongs to the DegT/DnrJ/EryC1 family.
      
 0.618
fliP
Flagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
      
 0.618
tlpPAS
Putative MCP-type signal transduction protein, PAS domain sensor protein; Not present in H. pylori and H. hepaticus, closest homolog in C. jejuni.
      
 0.618
HMU06610
Putative aminotransferase (degT family); May be involved in flagellar glycosylation; Belongs to the DegT/DnrJ/EryC1 family.
      
 0.618
flaB
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
      
 0.618
neuB3
N-acetylneuraminic acid synthetase; Homologous to H. pylori HP0178 involved in flagellar glycosylation.
      
 0.618
neuA2
Acylneuraminate cytidylyltransferase; Homologous to H. pylori HP0326a involved in flagellar glycosylation.
      
 0.618
cheV1
Putative chemotaxis protein cheV1 similar to H. pylori cheV1/HP0019.
      
 0.618
typA
GTP-binding protein typA homolog; evidence=ISS; db_xref=cjejuni:Cj0039c; date=20070321; method=automatic:reciprocal fasta.
       0.433
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.