STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAPhosphatidate cytidylyltransferase; evidence=ISS; db_xref=cjejuni:Cj1347c; date=20070321; method=automatic:reciprocal fasta; Belongs to the CDS family. (264 aa)    
Predicted Functional Partners:
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferas; evidence=ISS; db_xref=bcenocepacia:CAL2853; date=20070321; method=automatic:reciprocal fasta; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.944
plsC
Putative 1-acyl-SN-glycerol-3-phosphate acyltransferase; evidence=ISS; db_xref=cjejuni:Cj0516; date=20070321; method=automatic:reciprocal fasta; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
 
  
 0.941
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; evidence=ISS; db_xref=cjejuni:Cj1114c; date=20070321; method=automatic:reciprocal fasta; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.933
dxr
Putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.925
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.921
HMU08820
Putative diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
    
 0.909
HMU07940
Putative D-2-hydroxyacid dehydrogenase; evidence=ISS; db_xref=cjejuni:Cj0373; date=20070321; method=automatic:reciprocal fasta; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.661
HMU04540
Putative membrane-associated zinc metalloprotease; evidence=ISS; db_xref=cjejuni:Cj1068; date=20070321; method=automatic:reciprocal fasta.
  
  
 0.622
tpiA
Putative triosephosphate isomerase; evidence=ISS; db_xref=cjejuni:Cj1401c; date=20070321; method=automatic:reciprocal fasta.
 
  
 0.592
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.562
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.