STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (163 aa)    
Predicted Functional Partners:
msrB
Putative methionine sulfoxide reductase B, MrsB; evidence=ISS; db_xref=cjejuni:Cj1112c; date=20070321; method=automatic:reciprocal fasta; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.970
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.946
rpoC
Putative DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.873
rplL
50S ribosomal protein L7 /L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
   0.760
rpsP
30S ribosomal protein S16; evidence=ISS; db_xref=cjejuni:Cj0710; date=20070321; method=automatic:reciprocal fasta; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.760
rpmB
50S ribosomal protein L28; evidence=ISS; db_xref=cjejuni:Cj0450c; date=20070321; method=automatic:reciprocal fasta; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.760
rplO
50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
    
   0.748
ppsA
Putative phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
  
    0.700
HMU10190
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 
 0.685
katA
Catalase; evidence=ISS; db_xref=bparapertussis:BPP4406; date=20070321; method=automatic:reciprocal fasta.
   
 
 0.685
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.