Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ggtGamma-glutamyltranspeptidase precursor; evidence=ISS; db_xref=senteritidisPT4:SEN3374; date=20070321; method=automatic:reciprocal fasta. (558 aa)    
Predicted Functional Partners:
putA
Putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
   
 
 0.948
pepA
Aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.925
HMU05860
Putative peptidase; evidence=ISS; db_xref=cjejuni:Cj0980; date=20070321; method=automatic:reciprocal fasta.
     
 0.903
gdh
NADP-specific glutamate dehydrogenase; evidence=ISS; db_xref=suberis:SUB0762; date=20070321; method=automatic:reciprocal fasta; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.862
glnA
Glutamine synthetase; evidence=ISS; db_xref=cjejuni:Cj0699c; date=20070321; method=automatic:reciprocal fasta; Belongs to the glutamine synthetase family.
     
 0.824
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
     
  0.800
sdaA
L-serine deaminase 1; evidence=ISS; db_xref=smarcescens:SMA2084; date=20070321; method=automatic:reciprocal fasta; Belongs to the iron-sulfur dependent L-serine dehydratase family.
      
 0.744
sdaC
Serine transporter; evidence=ISS; db_xref=yenterocolitica:YE1473; date=20070321; method=automatic:reciprocal fasta.
      
 0.743
sodB
Superoxide dismutase (Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.645
recA
recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
      
 0.623
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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