STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flhGPutative ATP-binding protein flhG/ylxH. (288 aa)    
Predicted Functional Partners:
flhF
Flagellar biosynthesis protein.
 
 
 0.994
fliM
Flagellar motor switch protein.
 
  
 0.950
fliY
Putative flagellar motor switch protein.
 
  
 0.946
fliA
Putative RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
 
  
 0.934
flgR
Signal-transduction regulatory protein FlgR; Homologous to flagellar activator of sigma54 FlgR of H. pylori.
  
 
 0.864
HMU12820
Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; evidence=ISS; db_xref=cjejuni:Cj0065c; date=20070321; method=automatic:top fasta hit.
       0.813
HMU12830
Putative metallopeptidase; evidence=ISS; db_xref=ssuis:SSU1624; date=20070321; method=automatic:reciprocal fasta; Belongs to the peptidase M24B family.
       0.813
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.813
HMU12790
Putative hypothetical protein; evidence=ISS.
       0.799
fliG
Flagellar motor switch protein.
 
  
 0.787
Your Current Organism:
Helicobacter mustelae
NCBI taxonomy Id: 679897
Other names: H. mustelae 12198, Helicobacter mustelae 12198, Helicobacter mustelae str. 12198, Helicobacter mustelae strain 12198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.