STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH60784.1Phage shock protein C, PspC; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: mma:MM_1042 transcriptional regulator; PFAM: PspC domain protein; SPTR: Q8PY22 Transcriptional regulator; PFAM: PspC domain. (77 aa)    
Predicted Functional Partners:
AEH60783.1
PKD domain containing protein; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601:IPR000923:IPR008972; KEGG: mba:Mbar_A3737 hypothetical protein; PFAM: PKD domain containing protein; blue (type 1) copper domain protein; SMART: PKD domain containing protein; SPTR: Q464U3 Putative uncharacterized protein; PFAM: Copper binding proteins, plastocyanin/azurin family; PKD domain.
       0.538
AEH60701.1
COGs: COG3920 Signal transduction histidine kinase; InterPro IPR011495:IPR000014; KEGG: rci:LRC339 putative signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; SPTR: Q0W8I2 Putative signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; TIGRFAM: PAS domain S-box.
  
 
 0.406
AEH60755.1
COGs: COG5002 Signal transduction histidine kinase; InterProIPR013767:IPR013655:IPR003661:IPR003594:IPR 009082:IPR004358:IPR000014:IPR001610:IPR005467:IPR000700; KEGG: mbu:Mbur_1024 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Q12X67 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine ki [...]
  
 
 0.406
AEH60933.1
COGs: COG3920 Signal transduction histidine kinase; InterProIPR000014:IPR003594:IPR013655:IPR011495:IPR 005467:IPR000700; KEGG: rci:RCIX1713 putative signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; SPTR: Q0W3W1 Putative signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.406
AEH61036.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003018:IPR003661:IPR003594:IPR004358:IPR 009082:IPR000014:IPR005467; KEGG: mbu:Mbur_0262 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SPTR: Q12Z57 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.
  
 
 0.406
AEH61529.1
COGs: COG3920 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR003594:IPR 013655:IPR013656:IPR011495:IPR001610:IPR003018; KEGG: mba:Mbar_A0404 hypothetical protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; GAF domain protein; SPTR: Q46FF5 Putative uncharacterized protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; Histidine kinase- [...]
  
 
 0.406
Your Current Organism:
Methanosalsum zhilinae
NCBI taxonomy Id: 679901
Other names: M. zhilinae DSM 4017, Methanosalsum zhilinae DSM 4017, Methanosalsum zhilinae str. DSM 4017, Methanosalsum zhilinae strain DSM 4017
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