STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH61038.1KEGG: mac:MA1298 hypothetical protein; SPTR: Q8TR83 Predicted protein. (646 aa)    
Predicted Functional Partners:
AEH61037.1
COGs: COG0630 Type IV secretory pathway VirB11 protein involved in flagella biosynthesis; InterPro IPR001482:IPR017441; KEGG: mma:MM_2298 hypothetical protein; PFAM: type II secretion system protein E; SPTR: Q8PUN4 Conserved protein; PFAM: Type II/IV secretion system protein.
 
     0.942
AEH59959.1
Protein of unknown function DUF87; COGs: COG0433 ATPase; InterPro IPR002789; KEGG: mma:MM_1491 putative nucleotidyltransferase; PFAM: protein of unknown function DUF87; SPTR: Q8PWT5 Putative nucleotidyltransferase; PFAM: Domain of unknown function DUF87; Bacterial protein of unknown function (DUF853).
 
     0.696
AEH60546.1
Phosphoesterase DHHA1; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156; KEGG: mac:MA2569 phosphoesterase; PFAM: phosphoesterase DHHA1; phosphoesterase RecJ domain protein; SPTR: Q8TMT3 Phosphoesterase; PFAM: DHHA1 domain; DHH family.
  
     0.658
AEH61227.1
Conserved hypothetical protein; COGs: COG1549 Queuine tRNA-ribosyltransferase contain PUA domain; KEGG: mba:Mbar_A3462 hypothetical protein; SPTR: Q465V7 Putative uncharacterized protein; manually curated.
  
     0.648
AEH60803.1
InterPro IPR011009; KEGG: mac:MA3042 hypothetical protein; SPTR: Q8TLJ4 Predicted protein; PFAM: Phosphotransferase enzyme family.
  
     0.639
AEH60726.1
Transcriptional regulator, MarR family; COGs: COG2512 Uncharacterized membrane-associated protein/domain; InterPro IPR000835:IPR008969; KEGG: mbu:Mbur_1085 hypothetical protein; PFAM: regulatory protein MarR; SPTR: Q12X11 Putative uncharacterized protein; PFAM: MarR family.
  
     0.565
AEH61412.1
InterPro IPR008972; KEGG: mac:MA1685 hypothetical protein; SPTR: Q8TQ67 Putative uncharacterized protein.
  
     0.542
AEH61148.1
InterPro IPR002559; KEGG: mpl:Mpal_2299 transposase IS4 family protein; PFAM: transposase IS4 family protein; SPTR: B8GE84 Transposase IS4 family protein; PFAM: Transposase DDE domain.
  
     0.539
AEH60004.1
InterPro IPR002559; KEGG: mbu:Mbur_0446 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Q12YP3 DDE superfamily, IS4 transposase; PFAM: Transposase DDE domain.
  
     0.515
AEH61778.1
InterPro IPR011991:IPR001845; KEGG: mbu:Mbur_0946 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Q12XD8 Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.
  
     0.512
Your Current Organism:
Methanosalsum zhilinae
NCBI taxonomy Id: 679901
Other names: M. zhilinae DSM 4017, Methanosalsum zhilinae DSM 4017, Methanosalsum zhilinae str. DSM 4017, Methanosalsum zhilinae strain DSM 4017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.