STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_0155GPR1/FUN34/yaaH family protein; COGs: COG1584 membrane protein; InterPro IPR000791; KEGG: mtp:Mthe_0263 GPR1/FUN34/YaaH family protein; PFAM: GPR1/FUN34/yaaH family protein; SPTR: GPR1/FUN34/yaaH family protein; PFAM: GPR1/FUN34/yaaH family. (194 aa)    
Predicted Functional Partners:
Mpet_1080
COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020845:IPR000873; KEGG: mbn:Mboo_1682 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
  
  
 0.597
Mpet_1079
DNA binding domain protein, excisionase family; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR010093:IPR020845:IPR000873; KEGG: mem:Memar_1151 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: AMP-binding enzyme; TIGRFAM: DNA binding domain, excisionase family.
  
  
 0.561
Mpet_2627
acetate/CoA ligase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873:IPR011904:IPR020845; KEGG: mbu:Mbur_1137 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase.
  
  
 0.519
guaAB
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.400
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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