STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
Mpet_0623Cobaltochelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: mtp:Mthe_0441 cobaltochelatase; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: Magnesium chelatase family protein; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit. (1231 aa)    
Predicted Functional Partners:
Mpet_2232
COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR011704:IPR002035; KEGG: mma:MM_2003 magnesium-chelatase subunit; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; SPTR: Magnesium-chelatase subunit; PFAM: von Willebrand factor type A domain; AAA domain (dynein-related subfamily).
 
  
 0.969
Mpet_0638
COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR002035:IPR011704:IPR003593; KEGG: mma:MM_2003 magnesium-chelatase subunit; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; PRIAM: Magnesium chelatase; SMART: von Willebrand factor type A; AAA ATPase; SPTR: Magnesium-chelatase subunit; manually curated; PFAM: von Willebrand factor type A domain; AAA domain (dynein-related subfamily); TIGRFAM: cobaltochelatase subunit.
 
  
 0.968
cbiA-2
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP- dependent amidation of the two carboxylate groups at positions a and c of Ni-sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source.
 
 
 0.948
Mpet_2294
COGs: COG2109 ATP:corrinoid adenosyltransferase; InterPro IPR003724; KEGG: mhu:Mhun_0284 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: Cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase.
    
 0.927
Mpet_2240
Cobaltochelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: mhu:Mhun_0282 CobN/magnesium chelatase; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: Hydrogenobyrinic acid a,c-diamide cobaltochelatase; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
  
  
 
0.914
Mpet_0633
Cobaltochelatase; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672; KEGG: mtp:Mthe_1598 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase; PRIAM: Cobaltochelatase; SPTR: Hydrogenobyrinic acid a,c-diamide cobaltochelatase; PFAM: CobN/Magnesium Chelatase; TIGRFAM: cobaltochelatase, CobN subunit.
  
  
 
0.904
Mpet_2231
COGs: COG1239 Mg-chelatase subunit ChlI; InterPro IPR003593; KEGG: dsy:DSY3870 hypothetical protein; PRIAM: Magnesium chelatase; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily).
 
  
 0.881
Mpet_0625
COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: mem:Memar_2099 transport system permease protein; PFAM: transport system permease protein; SPTR: Transport system permease protein; PFAM: FecCD transport family.
  
  
 0.795
Mpet_0624
ABC transporter related protein; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871:IPR003439:IPR003593; KEGG: mem:Memar_2100 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-related protein; PFAM: ABC transporter.
  
  
 0.783
Mpet_0626
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: mem:Memar_2098 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Periplasmic binding protein; PFAM: Periplasmic binding protein.
  
  
 0.759
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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