STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_0682Protein of unknown function UPF0153; InterPro IPR005358; KEGG: mem:Memar_0737 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153). (180 aa)    
Predicted Functional Partners:
Mpet_0681
TraB family protein; COGs: COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein); InterPro IPR002816:IPR005230; KEGG: mem:Memar_0738 TraB family protein; PFAM: TraB determinant protein; SPTR: TraB family protein; TIGRFAM: TraB family protein; PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB.
       0.880
guaAA
GMP synthase, small subunit; Catalyzes the synthesis of GMP from XMP.
       0.842
Mpet_0684
COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR003200:IPR002805; KEGG: mem:Memar_0735 hypothetical protein; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; SPTR: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; TIGRFAM: conserved hypothetical protein TIGR00303; Belongs to the UPF0284 family.
       0.707
Mpet_1663
Phosphoesterase RecJ domain protein; COGs: COG1107 RecJ-like exonuclease contains DnaJ-type Zn finger domain; InterPro IPR003029:IPR004365:IPR001667; KEGG: mem:Memar_1551 phosphoesterase domain-containing protein; PFAM: phosphoesterase RecJ domain protein; nucleic acid binding OB-fold tRNA/helicase-type; RNA binding S1 domain protein; SPTR: Phosphoesterase, RecJ domain protein; PFAM: DHH family; S1 RNA binding domain; OB-fold nucleic acid binding domain.
  
    0.654
Mpet_0680
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mem:Memar_0739 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
       0.647
Mpet_1689
Putative transcriptional regulator, AsnC family; KEGG: mem:Memar_1565 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: B-block binding subunit of TFIIIC.
 
     0.614
Mpet_1025
COGs: COG1202 Superfamily II helicase; KEGG: mem:Memar_1610 superfamily II helicase-like protein; SPTR: Superfamily II helicase-like protein.
  
     0.613
Mpet_0008
Protein of unknown function DUF343; InterPro IPR005651; KEGG: mem:Memar_0006 hypothetical protein; PFAM: protein of unknown function DUF343; SPTR: Putative uncharacterized protein; PFAM: Trm112p-like protein.
 
     0.594
Mpet_2611
Chorismate mutase, type II; InterPro IPR002701:IPR020822; KEGG: mbn:Mboo_0074 chorismate mutase; PFAM: Chorismate mutase, type II; SPTR: Chorismate mutase; PFAM: Chorismate mutase type II.
 
     0.572
Mpet_2013
Protein of unknown function DUF555; COGs: COG1885 conserved hypothetical protein; InterPro IPR007564; KEGG: mbn:Mboo_1659 hypothetical protein; PFAM: Protein of unknown function DUF555; SPTR: UPF0212 protein Mboo_1659; PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.571
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.