STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_0744GTP-binding protein HSR1-related protein; COGs: COG0486 GTPase; InterPro IPR001806:IPR002917; KEGG: mem:Memar_1793 GTP-binding protein, HSR1-related; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein, HSR1-related; PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain. (213 aa)    
Predicted Functional Partners:
Mpet_0473
AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterProIPR001440:IPR003959:IPR000641:IPR019734:IPR 003593:IPR013026; KEGG: dhd:Dhaf_3309 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; TPR repeat-containing protein; SMART: AAA ATPase; Tetratricopeptide repeat; SPTR: AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); Tetratricopeptide repeat.
  
 0.997
Mpet_0742
Protein of unknown function DUF2072, Zinc-ribbon; COGs: COG3364 Zn-ribbon containing protein; InterPro IPR018645; KEGG: mbn:Mboo_2233 hypothetical protein; PFAM: Protein of unknown function DUF2072, Zinc-ribbon; SPTR: Putative uncharacterized protein; PFAM: Zn-ribbon containing protein (DUF2072).
 
   
 0.968
Mpet_0743
COGs: COG3365 conserved hypothetical protein; InterPro IPR012017; KEGG: mem:Memar_1792 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in archaea (DUF2073).
 
   
 0.967
Mpet_0816
COGs: COG0515 Serine/threonine protein kinase; InterProIPR008271:IPR000719:IPR017442:IPR020635:IPR 002290; KEGG: mem:Memar_1771 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Protein kinase; PFAM: Protein kinase domain.
  
 0.908
Mpet_1020
COGs: COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains; InterPro IPR000719; KEGG: mhu:Mhun_2725 protein kinase/helix-hairpin-helix DNA-binding domain-containing proteins; SPTR: TPR repeat protein; PFAM: Protein kinase domain.
  
 0.908
Mpet_1322
COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719:IPR017442:IPR008271:IPR020635:IPR 002290; KEGG: mbn:Mboo_1970 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Protein kinase; PFAM: Protein kinase domain.
  
 0.908
Mpet_1489
CHAD domain containing protein; COGs: COG0622 phosphoesterase; InterPro IPR007899:IPR004843; KEGG: mhu:Mhun_2988 metallophosphoesterase; PFAM: CHAD domain containing protein; metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; CHAD domain; TIGRFAM: phosphoesterase, MJ0936 family.
  
 0.908
Mpet_2630
COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719:IPR017442:IPR020635:IPR002290:IPR 008271; KEGG: mbn:Mboo_1970 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: Protein kinase; PFAM: Protein kinase domain; Periplasmic copper-binding protein (NosD).
  
 0.908
atpE
H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.894
rpl2
Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
 
 0.872
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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