STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_0803Regulatory protein ArsR; COGs: COG3398 conserved hypothetical protein; InterPro IPR001845; KEGG: mbu:Mbur_1830 hypothetical protein; SMART: regulatory protein ArsR; SPTR: Putative uncharacterized protein. (246 aa)    
Predicted Functional Partners:
Mpet_1804
KEGG: mbn:Mboo_1621 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.632
Mpet_2604
KEGG: mpl:Mpal_0407 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.626
Mpet_1858
RNA polymerase Rpb4; COGs: COG1460 conserved hypothetical protein; InterPro IPR005574; KEGG: mpl:Mpal_0548 RNA polymerase Rpb4; PFAM: RNA polymerase Rpb4; SPTR: RNA polymerase Rpb4; PFAM: RNA polymerase Rpb4.
  
     0.587
Mpet_0777
Exosortase EpsH-related protein; COGs: COG4083 membrane protein; InterPro IPR019127; KEGG: mbn:Mboo_0910 cytochrome oxidase, subunit I, putative; PFAM: Exosortase EpsH-related; SPTR: Cytochrome oxidase, subunit I, putative; PFAM: Transmembrane exosortase (Exosortase_EpsH).
 
     0.586
Mpet_0220
Type II secretion system F domain protein; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mbn:Mboo_2354 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
  
     0.549
Mpet_0011
Exosortase EpsH-related protein; COGs: COG4083 membrane protein; InterPro IPR019127; KEGG: mpl:Mpal_2092 cytochrome oxidase, subunit I, putative; PFAM: Exosortase EpsH-related; SPTR: Cytochrome oxidase, subunit I, putative; PFAM: Transmembrane exosortase (Exosortase_EpsH).
 
     0.525
Mpet_0998
Methanogenesis marker protein 9; COGs: COG4008 metal-binding transcription factor; InterPro IPR017671; KEGG: mem:Memar_1729 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: methanogenesis marker protein 9; TIGRFAM: TIM-barrel protein, putative; putative methanogenesis marker domain 9.
 
     0.502
Mpet_0802
KEGG: mbu:Mbur_1831 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.499
Mpet_2654
Protein of unknown function DUF1621; COGs: COG2450 conserved hypothetical protein; InterPro IPR012426; KEGG: mem:Memar_0232 hypothetical protein; PFAM: Protein of unknown function DUF1621; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF552).
  
     0.495
Mpet_2751
KEGG: mhu:Mhun_0769 S-layer-like domain-containing protein; SPTR: S-layer domain-like.
  
     0.494
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.