Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mpet_1162 | Mpet_1163 | Protein of unknown function DUF161; COGs: COG2364 membrane protein; InterPro IPR003740; KEGG: mpl:Mpal_2290 uncharacterized membrane protein; PFAM: protein of unknown function DUF161; SPTR: Uncharacterized membrane protein. | InterPro IPR000504; KEGG: mem:Memar_1256 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain). | 0.466 |
Mpet_1163 | Mpet_1162 | InterPro IPR000504; KEGG: mem:Memar_1256 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain). | Protein of unknown function DUF161; COGs: COG2364 membrane protein; InterPro IPR003740; KEGG: mpl:Mpal_2290 uncharacterized membrane protein; PFAM: protein of unknown function DUF161; SPTR: Uncharacterized membrane protein. | 0.466 |