STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_1180KEGG: hmu:Hmuk_3341 protein of unknown function DUF1333; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF964). (135 aa)    
Predicted Functional Partners:
Mpet_1181
Hypothetical protein; InterPro IPR005479; KEGG: hla:Hlac_1222 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.678
Mpet_1178
KEGG: hla:Hlac_1223 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF964).
      
0.495
Mpet_1179
InterPro IPR005479; KEGG: hla:Hlac_3447 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.495
Mpet_1182
KEGG: mpl:Mpal_1277 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.464
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.