STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_1237COGs: COG1549 Queuine tRNA-ribosyltransferase contain PUA domain; KEGG: mem:Memar_1324 queuine tRNA-ribosyltransferase; SPTR: Queuine tRNA-ribosyltransferases contain PUA domain-like protein. (208 aa)    
Predicted Functional Partners:
Mpet_1238
COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: mem:Memar_1145 peptidylprolyl isomerase, FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: Peptidylprolyl isomerase, FKBP-type; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase.
       0.773
Mpet_1026
COGs: COG4749 conserved hypothetical protein; InterPro IPR014518; KEGG: mbn:Mboo_1053 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in archaea (DUF2150).
  
     0.730
Mpet_0517
Protein of unknown function UPF0153; InterPro IPR005358; KEGG: mla:Mlab_1546 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).
  
     0.704
Mpet_1607
Exosortase EpsH-related protein; COGs: COG4083 membrane protein; InterPro IPR019127; KEGG: mbn:Mboo_0910 cytochrome oxidase, subunit I, putative; PFAM: Exosortase EpsH-related; SPTR: Cytochrome oxidase, subunit I, putative; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.696
Mpet_0998
Methanogenesis marker protein 9; COGs: COG4008 metal-binding transcription factor; InterPro IPR017671; KEGG: mem:Memar_1729 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: methanogenesis marker protein 9; TIGRFAM: TIM-barrel protein, putative; putative methanogenesis marker domain 9.
  
     0.695
Mpet_2491
KEGG: mhu:Mhun_1798 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
Mpet_0084
Oligosaccharyl transferase STT3 subunit; COGs: COG1287 membrane protein required for N-linked glycosylation; InterPro IPR003674; KEGG: mem:Memar_2235 oligosaccharyl transferase, STT3 subunit; PFAM: Oligosaccharyl transferase STT3 subunit; SPTR: Oligosaccharyl transferase, STT3 subunit; PFAM: Oligosaccharyl transferase STT3 subunit.
 
     0.675
Mpet_0011
Exosortase EpsH-related protein; COGs: COG4083 membrane protein; InterPro IPR019127; KEGG: mpl:Mpal_2092 cytochrome oxidase, subunit I, putative; PFAM: Exosortase EpsH-related; SPTR: Cytochrome oxidase, subunit I, putative; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.665
Mpet_0777
Exosortase EpsH-related protein; COGs: COG4083 membrane protein; InterPro IPR019127; KEGG: mbn:Mboo_0910 cytochrome oxidase, subunit I, putative; PFAM: Exosortase EpsH-related; SPTR: Cytochrome oxidase, subunit I, putative; PFAM: Transmembrane exosortase (Exosortase_EpsH).
  
     0.664
Mpet_0312
KEGG: mem:Memar_1820 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CARDB.
 
     0.656
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.