Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mpet_1306Protein of unknown function DUF167; COGs: COG1872 conserved hypothetical protein; InterPro IPR003746:IPR005228; KEGG: mem:Memar_1018 hypothetical protein; PFAM: protein of unknown function DUF167; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: conserved hypothetical protein TIGR00251; Belongs to the UPF0235 family. (105 aa)    
Predicted Functional Partners:
Mpet_1307
Hypothetical protein.
       0.586
trmY
Protein of unknown function DUF358; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
 
     0.559
Mpet_2116
Transcriptional regulator, ArsR family; COGs: COG4860 conserved hypothetical protein; InterPro IPR014517; KEGG: mem:Memar_0418 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Transcriptional regulator, ArsR family; PFAM: ArsR transcriptional regulator.
 
     0.546
Mpet_1311
Radical SAM domain protein; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR000385; KEGG: mem:Memar_1003 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
       0.540
dnaG
TOPRIM domain protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.508
Mpet_0996
Protein of unknown function DUF447; COGs: COG2457 conserved hypothetical protein; InterPro IPR007386:IPR016733; KEGG: mem:Memar_1727 hypothetical protein; PFAM: protein of unknown function DUF447; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF447).
 
     0.507
Mpet_0793
COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002315:IPR006195:IPR002314:IPR004154; KEGG: mem:Memar_1419 glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; SPTR: Glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type.
       0.495
Mpet_0769
Transcriptional regulator, TrmB; COGs: COG4738 transcriptional regulator protein; InterPro IPR017185:IPR002831; KEGG: mbn:Mboo_0917 transcriptional regulator, TrmB; PFAM: transcriptional regulator TrmB; SPTR: Transcriptional regulator, TrmB; PFAM: Sugar-specific transcriptional regulator TrmB.
  
     0.485
Mpet_1305
Dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722:IPR006680:IPR002195; KEGG: mem:Memar_1019 dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type.
       0.475
Mpet_0597
COGs: COG4090 conserved hypothetical protein; InterPro IPR009183; KEGG: mem:Memar_2183 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in archaea (DUF2124).
  
     0.470
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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