STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_1405COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mac:MA1175 mannosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Mannosyltransferase; PFAM: Glycosyl transferases group 1. (359 aa)    
Predicted Functional Partners:
Mpet_1355
Glycosyl transferase family 2; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR001732:IPR014026:IPR001173; KEGG: mpd:MCP_0949 hypothetical protein; PFAM: glycosyl transferase family 2; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: Putative uncharacterized protein; manually curated; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; Glycosyl transferase family 2; TIGRFAM: nucleotide sugar dehydrogenase.
 
  
 0.913
Mpet_1407
NAD-dependent epimerase/dehydratase; COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR001509; KEGG: bbe:BBR47_17540 GDP-6-deoxy-D-lyxo-4-hexulose reductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative NAD dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.877
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.856
Mpet_0610
KEGG: mpl:Mpal_0286 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acetyl xylan esterase (AXE1).
  
 
 0.840
Mpet_0731
KEGG: mma:MM_3308 hypothetical protein; SPTR: Conserved protein.
  
 
 0.840
Mpet_1403
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: mba:Mbar_A0371 putative ABC-2 type transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC-2 type transport system ATP-binding protein; PFAM: ABC transporter.
 
 
 0.801
Mpet_1016
Nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: mbn:Mboo_1764 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenas [...]
 
  
 0.783
Mpet_1404
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412:IPR013525; KEGG: mba:Mbar_A0370 putative ABC-2 type transport system permease protein; PFAM: ABC-2 type transporter; SPTR: Putative ABC-2 type transport system permease protein; PFAM: ABC-2 type transporter.
 
  
 0.778
Mpet_1489
CHAD domain containing protein; COGs: COG0622 phosphoesterase; InterPro IPR007899:IPR004843; KEGG: mhu:Mhun_2988 metallophosphoesterase; PFAM: CHAD domain containing protein; metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; CHAD domain; TIGRFAM: phosphoesterase, MJ0936 family.
   
 
 0.765
Mpet_1402
Methyltransferase type 11; InterPro IPR013216; KEGG: mac:MA1178 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; Methionine biosynthesis protein MetW.
 
  
 0.691
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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