STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_1498ABC transporter, ATPase, predicted; COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: cyp:PCC8801_3562 ABC transporter ATPase; PFAM: ABC transporter, ATPase, predicted; SPTR: ABC transporter ATPase; PFAM: Predicted ATPase of the ABC class. (568 aa)    
Predicted Functional Partners:
Mpet_1497
Ribonuclease III; COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR000999:IPR001412; KEGG: mhu:Mhun_1116 ribonuclease III; PFAM: ribonuclease III; SMART: ribonuclease III; SPTR: Ribonuclease III; PFAM: RNase3 domain.
       0.773
Mpet_1496
Putative PAS/PAC sensor protein; InterPro IPR000014:IPR000700:IPR013656; KEGG: mhu:Mhun_0005 PAS/PAC sensor signal transduction histidine kinase; PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein; SPTR: Sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
       0.486
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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