STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_1663Phosphoesterase RecJ domain protein; COGs: COG1107 RecJ-like exonuclease contains DnaJ-type Zn finger domain; InterPro IPR003029:IPR004365:IPR001667; KEGG: mem:Memar_1551 phosphoesterase domain-containing protein; PFAM: phosphoesterase RecJ domain protein; nucleic acid binding OB-fold tRNA/helicase-type; RNA binding S1 domain protein; SPTR: Phosphoesterase, RecJ domain protein; PFAM: DHH family; S1 RNA binding domain; OB-fold nucleic acid binding domain. (611 aa)    
Predicted Functional Partners:
Mpet_1664
TrkA-C domain protein; COGs: COG3273 conserved hypothetical protein; InterPro IPR008170:IPR006037; KEGG: mem:Memar_1552 TrkA domain-containing protein; PFAM: TrkA-C domain protein; PhoU family protein; SPTR: TrkA-C domain protein; PFAM: TrkA-C domain; PhoU domain.
       0.844
Mpet_1025
COGs: COG1202 Superfamily II helicase; KEGG: mem:Memar_1610 superfamily II helicase-like protein; SPTR: Superfamily II helicase-like protein.
  
   
 0.714
Mpet_1668
Conserved hypothetical protein; COGs: COG0237 Dephospho-CoA kinase; KEGG: mbn:Mboo_1593 hypothetical protein; SPTR: UPF0200 protein Mboo_1593.
 
     0.710
Mpet_2114
DEAD/DEAH box helicase domain protein; COGs: COG1202 Superfamily II helicase; InterPro IPR014001:IPR001650:IPR011545:IPR014021; KEGG: mem:Memar_0420 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
  
    0.702
Mpet_0998
Methanogenesis marker protein 9; COGs: COG4008 metal-binding transcription factor; InterPro IPR017671; KEGG: mem:Memar_1729 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: methanogenesis marker protein 9; TIGRFAM: TIM-barrel protein, putative; putative methanogenesis marker domain 9.
  
    0.697
Mpet_1847
PP-loop domain-containing protein; COGs: COG2117 subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; KEGG: mpl:Mpal_0537 PP-loop domain-containing protein; SPTR: PP-loop domain-containing protein; PFAM: Asparagine synthase.
  
     0.696
Mpet_2013
Protein of unknown function DUF555; COGs: COG1885 conserved hypothetical protein; InterPro IPR007564; KEGG: mbn:Mboo_1659 hypothetical protein; PFAM: Protein of unknown function DUF555; SPTR: UPF0212 protein Mboo_1659; PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
  
     0.694
Mpet_0682
Protein of unknown function UPF0153; InterPro IPR005358; KEGG: mem:Memar_0737 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153).
  
    0.654
Mpet_2296
Methanogenesis marker protein 10; COGs: COG1625 Fe-S oxidoreductase related to NifB/MoaA family; InterPro IPR007197:IPR007549:IPR017672; KEGG: mem:Memar_1632 hypothetical protein; PFAM: protein of unknown function DUF512; Radical SAM domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: methanogenesis marker protein 10; PFAM: Radical SAM superfamily; Protein of unknown function (DUF512); TIGRFAM: putative methanogenesis marker protein 10.
  
     0.651
Mpet_1309
Protein of unknown function UPF0058; COGs: COG1745 metal-binding protein; InterPro IPR002753; KEGG: mbn:Mboo_0845 hypothetical protein; PFAM: Protein of unknown function UPF0058; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0058.
  
   
 0.649
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.