STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_1981Conserved hypothetical protein; InterPro IPR013373:IPR018247; KEGG: mhu:Mhun_0296 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1628); TIGRFAM: archaeal flagellin N-terminal-like domain. (239 aa)    
Predicted Functional Partners:
Mpet_1982
Protein of unknown function DUF1628; InterPro IPR012859; KEGG: mhu:Mhun_0299 hypothetical protein; PFAM: Protein of unknown function DUF1628; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1628).
      
0.773
Mpet_1983
ABC transporter substrate binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; KEGG: mpd:MCP_1078 ABC transporter substrate binding protein; SPTR: ABC transporter substrate binding protein; PFAM: Periplasmic solute binding protein family.
       0.428
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.