Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_1997Protein of unknown function DUF1188; COGs: COG4017 conserved hypothetical protein; InterPro IPR009573; KEGG: mth:MTH1145 hypothetical protein; PFAM: Protein of unknown function DUF1188; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1188). (264 aa)    
Predicted Functional Partners:
Mpet_1996
COGs: COG4019 conserved hypothetical protein; InterPro IPR012019; KEGG: mth:MTH1144 hypothetical protein; SPTR: Conserved protein; PFAM: Protein of unknown function (DUF3236).
  
  
 0.985
Mpet_1995
Radical SAM domain protein; COGs: COG0502 Biotin synthase; InterPro IPR006638:IPR007197; KEGG: mth:MTH1143 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily.
     
 0.870
Mpet_2000
Protein of unknown function UPF0254; COGs: COG4016 conserved hypothetical protein; InterPro IPR009625; KEGG: mla:Mlab_1743 hypothetical protein; PFAM: Protein of unknown function UPF0254; SPTR: UPF0254 protein Mlab_1743; PFAM: Uncharacterised protein family (UPF0254); Belongs to the UPF0254 family.
     
 0.857
Mpet_1999
Conserved hypothetical protein; COGs: COG4015 dinucleotide-utilizing protein of the ThiF/HesA family; InterPro IPR012028; KEGG: mth:MTH1147 hypothetical protein; SPTR: Conserved protein.
     
 0.853
Mpet_1998
Protein of unknown function DUF34; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: mhu:Mhun_0228 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486.
       0.833
Mpet_2001
COGs: COG4018 conserved hypothetical protein; InterPro IPR016760; KEGG: mhu:Mhun_0231 hypothetical protein; PFAM: Uncharacterised conserved protein UCP019375; SPTR: Conserved protein (FlpA); PFAM: Fibrillarin-like archaeal protein.
     
 0.572
hmd
Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
     
 0.505
Mpet_1994
Coenzyme F420-reducing hydrogenase delta subunit; COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR004411:IPR000671; KEGG: mpl:Mpal_0085 coenzyme F420-reducing hydrogenase delta subunit; PFAM: peptidase M52 hydrogen uptake protein; SPTR: Coenzyme F420-reducing hydrogenase delta subunit; TIGRFAM: coenzyme F420-reducing hydrogenase delta subunit; hydrogenase maturation protease; PFAM: Hydrogenase maturation protease; TIGRFAM: coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit); hydrogenase maturation protease.
     
 0.406
pheS
COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR006195:IPR002319:IPR004529:IPR017441; KEGG: mem:Memar_0643 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily.
  
    0.403
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.