STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_2001COGs: COG4018 conserved hypothetical protein; InterPro IPR016760; KEGG: mhu:Mhun_0231 hypothetical protein; PFAM: Uncharacterised conserved protein UCP019375; SPTR: Conserved protein (FlpA); PFAM: Fibrillarin-like archaeal protein. (505 aa)    
Predicted Functional Partners:
Mpet_1995
Radical SAM domain protein; COGs: COG0502 Biotin synthase; InterPro IPR006638:IPR007197; KEGG: mth:MTH1143 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily.
  
  
 0.961
hmd
Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
  
  
 0.859
Mpet_2000
Protein of unknown function UPF0254; COGs: COG4016 conserved hypothetical protein; InterPro IPR009625; KEGG: mla:Mlab_1743 hypothetical protein; PFAM: Protein of unknown function UPF0254; SPTR: UPF0254 protein Mlab_1743; PFAM: Uncharacterised protein family (UPF0254); Belongs to the UPF0254 family.
     
 0.581
Mpet_1997
Protein of unknown function DUF1188; COGs: COG4017 conserved hypothetical protein; InterPro IPR009573; KEGG: mth:MTH1145 hypothetical protein; PFAM: Protein of unknown function DUF1188; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1188).
     
 0.572
Mpet_1999
Conserved hypothetical protein; COGs: COG4015 dinucleotide-utilizing protein of the ThiF/HesA family; InterPro IPR012028; KEGG: mth:MTH1147 hypothetical protein; SPTR: Conserved protein.
     
 0.558
Mpet_1996
COGs: COG4019 conserved hypothetical protein; InterPro IPR012019; KEGG: mth:MTH1144 hypothetical protein; SPTR: Conserved protein; PFAM: Protein of unknown function (DUF3236).
     
 0.547
Mpet_1998
Protein of unknown function DUF34; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: mhu:Mhun_0228 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: conserved hypothetical protein TIGR00486.
       0.429
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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