STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_2011KEGG: mbn:Mboo_1661 hypothetical protein; SPTR: Putative uncharacterized protein. (119 aa)    
Predicted Functional Partners:
Mpet_2012
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mem:Memar_0857 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
       0.904
Mpet_2013
Protein of unknown function DUF555; COGs: COG1885 conserved hypothetical protein; InterPro IPR007564; KEGG: mbn:Mboo_1659 hypothetical protein; PFAM: Protein of unknown function DUF555; SPTR: UPF0212 protein Mboo_1659; PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
       0.848
Mpet_2014
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002139:IPR011611:IPR002173; KEGG: mpl:Mpal_1085 PfkB domain protein; PFAM: PfkB domain protein; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
       0.790
Mpet_2010
KEGG: mla:Mlab_0579 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.672
Mpet_2015
Protein of unknown function DUF2070, membrane; COGs: COG3356 membrane protein; InterPro IPR019204; KEGG: mem:Memar_0860 hypothetical protein; PFAM: Protein of unknown function DUF2070, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2070).
       0.663
Mpet_2007
Phosphoesterase RecJ domain protein; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156; KEGG: mem:Memar_0429 phosphoesterase domain-containing protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Phosphoesterase, RecJ domain protein; PFAM: DHHA1 domain; DHH family.
       0.588
Mpet_2008
KEGG: mhu:Mhun_2509 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Transcription factor Pcc1.
       0.588
rps3ae
COGs: COG1890 Ribosomal protein S3AE; InterPro IPR001593; KEGG: mem:Memar_0427 30S ribosomal protein S3Ae; PFAM: ribosomal protein S3Ae; SPTR: 30S ribosomal protein S3Ae; PFAM: Ribosomal S3Ae family; Belongs to the eukaryotic ribosomal protein eS1 family.
       0.588
rps15
COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR012606:IPR000589; KEGG: mhu:Mhun_2511 30S ribosomal protein S15P; PFAM: Ribosomal S13S15 domain protein; ribosomal protein S15; SPTR: 30S ribosomal protein S15P/S13e; PFAM: Ribosomal S13/S15 N-terminal domain; Ribosomal protein S15.
       0.523
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.