STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_2012COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mem:Memar_0857 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family. (175 aa)    
Predicted Functional Partners:
Mpet_2011
KEGG: mbn:Mboo_1661 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.904
ribL
Cytidyltransferase-related domain protein; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme.
    
  0.903
ribK
Transcriptional regulator, MarR family; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
     
  0.900
Mpet_2013
Protein of unknown function DUF555; COGs: COG1885 conserved hypothetical protein; InterPro IPR007564; KEGG: mbn:Mboo_1659 hypothetical protein; PFAM: Protein of unknown function DUF555; SPTR: UPF0212 protein Mboo_1659; PFAM: Protein of unknown function (DUF555); Belongs to the UPF0212 family.
       0.848
Mpet_0800
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845:IPR000873; KEGG: mbn:Mboo_0770 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
   
 
 0.811
Mpet_1896
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: mem:Memar_2154 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
   
 
 0.811
Mpet_2014
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002139:IPR011611:IPR002173; KEGG: mpl:Mpal_1085 PfkB domain protein; PFAM: PfkB domain protein; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.808
Mpet_0085
COGs: COG1944 conserved hypothetical protein; InterPro IPR017667:IPR003776; KEGG: mem:Memar_2237 hypothetical protein; PFAM: protein of unknown function DUF181; SPTR: Putative uncharacterized protein; TIGRFAM: methanogenesis marker protein 1; PFAM: YcaO-like family; TIGRFAM: uncharacterized domain; putative methanogenesis marker protein 1; bacteriocin biosynthesis docking scaffold, SagD family.
  
  
 0.733
Mpet_2007
Phosphoesterase RecJ domain protein; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156; KEGG: mem:Memar_0429 phosphoesterase domain-containing protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Phosphoesterase, RecJ domain protein; PFAM: DHHA1 domain; DHH family.
 
   
 0.705
Mpet_2015
Protein of unknown function DUF2070, membrane; COGs: COG3356 membrane protein; InterPro IPR019204; KEGG: mem:Memar_0860 hypothetical protein; PFAM: Protein of unknown function DUF2070, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2070).
 
     0.703
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.