Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_2016Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. (198 aa)    
Predicted Functional Partners:
Mpet_2057
Flagellin; InterPro IPR002774; KEGG: mem:Memar_0952 hypothetical protein; PFAM: flagellin; SPTR: Putative uncharacterized protein; PFAM: Archaebacterial flagellin.
  
  
 0.425
Mpet_2061
Type II secretion system F domain protein; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mem:Memar_0948 flagellar assembly protein J; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain.
  
  
 0.415
Mpet_2058
KEGG: mem:Memar_0951 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.411
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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