Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mpet_2016 | Mpet_2058 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | KEGG: mem:Memar_0951 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.407 |
Mpet_2016 | Mpet_2061 | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | Type II secretion system F domain protein; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mem:Memar_0948 flagellar assembly protein J; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain. | 0.410 |
Mpet_2058 | Mpet_2016 | KEGG: mem:Memar_0951 hypothetical protein; SPTR: Putative uncharacterized protein. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.407 |
Mpet_2058 | Mpet_2061 | KEGG: mem:Memar_0951 hypothetical protein; SPTR: Putative uncharacterized protein. | Type II secretion system F domain protein; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mem:Memar_0948 flagellar assembly protein J; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain. | 0.929 |
Mpet_2061 | Mpet_2016 | Type II secretion system F domain protein; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mem:Memar_0948 flagellar assembly protein J; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella. | 0.410 |
Mpet_2061 | Mpet_2058 | Type II secretion system F domain protein; COGs: COG1955 flagella assembly protein J; InterPro IPR018076; KEGG: mem:Memar_0948 flagellar assembly protein J; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain. | KEGG: mem:Memar_0951 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.929 |