Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mpet_2154ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR018134:IPR001626; KEGG: mem:Memar_0814 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; PFAM: ABC 3 transport family. (276 aa)    
Predicted Functional Partners:
Mpet_2155
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: mem:Memar_0815 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-related protein; manually curated; PFAM: ABC transporter.
 
 0.999
Mpet_2156
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127:IPR006128:IPR006129; KEGG: mem:Memar_0816 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family.
 
 0.998
Mpet_1985
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: rci:RCIX1002 ABC-type transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.945
Mpet_1983
ABC transporter substrate binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; KEGG: mpd:MCP_1078 ABC transporter substrate binding protein; SPTR: ABC transporter substrate binding protein; PFAM: Periplasmic solute binding protein family.
  
  
 0.702
Mpet_1704
COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR013196:IPR004143:IPR003142:IPR004408; KEGG: mem:Memar_1648 biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; biotin protein ligase domain protein; SPTR: Biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region.
 
   
 0.583
Mpet_2152
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR011620; KEGG: mla:Mlab_1669 TPR repeat-containing protein; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region; SPTR: Signal transduction histidine kinase, LytS; PFAM: 5TMR of 5TMR-LYT; Natural resistance-associated macrophage protein.
  
  
 0.568
Mpet_1984
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: mpd:MCP_1079 ABC transporter permease protein; PFAM: ABC-3 protein; SPTR: ABC transporter permease protein; PFAM: ABC 3 transport family.
  
  
 
0.493
Mpet_2157
KEGG: dal:Dalk_3866 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3089).
       0.488
Mpet_0403
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: mem:Memar_1364 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/ [...]
  
 
 0.479
Mpet_0405
Polar amino acid ABC transporter, inner membrane subunit; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: mhu:Mhun_0030 amino acid ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, Hi [...]
  
 
 0.479
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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