STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_2254KEGG: mem:Memar_2253 hypothetical protein; SPTR: Putative uncharacterized protein. (282 aa)    
Predicted Functional Partners:
Mpet_2253
Hypothetical protein; KEGG: afu:AF2384 molybdopterin oxidoreductase, molybdopterin binding subunit; SPTR: Sensor protein.
       0.773
Mpet_2255
KEGG: mem:Memar_2253 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.651
Mpet_2252
KEGG: mem:Memar_0828 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.531
Mpet_2256
Peptidase zinc-dependent; COGs: COG1913 Zn-dependent protease; InterPro IPR012962:IPR012091; KEGG: mpl:Mpal_1753 peptidase zinc-dependent; PFAM: peptidase zinc-dependent; SPTR: Peptidase zinc-dependent; PFAM: Peptidase family M54.
       0.527
Mpet_2251
Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680:IPR000802; KEGG: mem:Memar_0827 citrate transporter; PFAM: Citrate transporter; SPTR: Citrate transporter; PFAM: Citrate transporter; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes).
       0.486
Mpet_2250
KEGG: mem:Memar_0826 UspA domain-containing protein; SPTR: UspA domain protein; PFAM: Universal stress protein family.
       0.458
Mpet_2257
Protein of unknown function UPF0146; COGs: COG1255 conserved hypothetical protein; InterPro IPR005353; KEGG: mpl:Mpal_1752 protein of unknown function UPF0146; PFAM: Protein of unknown function UPF0146; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0146); Belongs to the UPF0146 family.
       0.401
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.