STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpet_2399Beta-lactamase domain-containing protein; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: mbn:Mboo_2153 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily. (257 aa)    
Predicted Functional Partners:
lig
DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.
       0.817
Mpet_2398
KEGG: mbn:Mboo_2152 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.647
Mpet_2397
KEGG: mbn:Mboo_2151 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.623
queE
Radical SAM domain protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
   
    0.596
Mpet_2008
KEGG: mhu:Mhun_2509 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Transcription factor Pcc1.
   
    0.483
Mpet_2396
ABC transporter, ATPase, predicted; COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: mpl:Mpal_1915 hypothetical protein; PFAM: ABC transporter, ATPase, predicted; SPTR: Putative uncharacterized protein; PFAM: Predicted ATPase of the ABC class.
       0.472
Mpet_0998
Methanogenesis marker protein 9; COGs: COG4008 metal-binding transcription factor; InterPro IPR017671; KEGG: mem:Memar_1729 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: methanogenesis marker protein 9; TIGRFAM: TIM-barrel protein, putative; putative methanogenesis marker domain 9.
  
  
 0.422
Mpet_0953
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932:IPR011620:IPR010822; KEGG: mem:Memar_2468 stage II sporulation E family protein; PFAM: Stage II sporulation E family protein; 5TM Receptors of the LytS-YhcK type transmembrane region; SMART: protein phosphatase 2C domain protein; SPTR: Stage II sporulation E family protein; PFAM: 5TMR of 5TMR-LYT; Stage II sporulation protein E (SpoIIE).
       0.408
Your Current Organism:
Methanolacinia petrolearia
NCBI taxonomy Id: 679926
Other names: M. petrolearia DSM 11571, Methanolacinia petrolearia DSM 11571, Methanoplanus petrolearius DSM 11571, Methanoplanus petrolearius SEBR 4847
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