Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Alfi_0348 | Alfi_0349 | Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase. | Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain. | 0.757 |
Alfi_0348 | Alfi_0350 | Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase. | Collagenase-like protease; PFAM: Collagenase; Peptidase family U32. | 0.766 |
Alfi_0348 | Alfi_0351 | Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase. | Hypothetical protein. | 0.449 |
Alfi_0349 | Alfi_0348 | Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain. | Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase. | 0.757 |
Alfi_0349 | Alfi_0350 | Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain. | Collagenase-like protease; PFAM: Collagenase; Peptidase family U32. | 0.775 |
Alfi_0349 | Alfi_0351 | Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain. | Hypothetical protein. | 0.457 |
Alfi_0350 | Alfi_0348 | Collagenase-like protease; PFAM: Collagenase; Peptidase family U32. | Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase. | 0.766 |
Alfi_0350 | Alfi_0349 | Collagenase-like protease; PFAM: Collagenase; Peptidase family U32. | Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain. | 0.775 |
Alfi_0350 | Alfi_0351 | Collagenase-like protease; PFAM: Collagenase; Peptidase family U32. | Hypothetical protein. | 0.458 |
Alfi_0351 | Alfi_0348 | Hypothetical protein. | Putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase. | 0.449 |
Alfi_0351 | Alfi_0349 | Hypothetical protein. | Beta-galactosidase/beta-glucuronidase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain. | 0.457 |
Alfi_0351 | Alfi_0350 | Hypothetical protein. | Collagenase-like protease; PFAM: Collagenase; Peptidase family U32. | 0.458 |