Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Alfi_0593 | Alfi_0594 | Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative. | Putative membrane protein; PFAM: SNARE associated Golgi protein. | 0.535 |
Alfi_0593 | Alfi_0595 | Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative. | PFAM: Acetyltransferase (GNAT) family. | 0.521 |
Alfi_0593 | Alfi_0596 | Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative. | PFAM: Phage protein Gp37/Gp68. | 0.521 |
Alfi_0594 | Alfi_0593 | Putative membrane protein; PFAM: SNARE associated Golgi protein. | Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative. | 0.535 |
Alfi_0594 | Alfi_0595 | Putative membrane protein; PFAM: SNARE associated Golgi protein. | PFAM: Acetyltransferase (GNAT) family. | 0.752 |
Alfi_0594 | Alfi_0596 | Putative membrane protein; PFAM: SNARE associated Golgi protein. | PFAM: Phage protein Gp37/Gp68. | 0.752 |
Alfi_0594 | Alfi_1431 | Putative membrane protein; PFAM: SNARE associated Golgi protein. | Putative membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN). | 0.429 |
Alfi_0594 | Alfi_2986 | Putative membrane protein; PFAM: SNARE associated Golgi protein. | Hypothetical protein. | 0.502 |
Alfi_0595 | Alfi_0593 | PFAM: Acetyltransferase (GNAT) family. | Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative. | 0.521 |
Alfi_0595 | Alfi_0594 | PFAM: Acetyltransferase (GNAT) family. | Putative membrane protein; PFAM: SNARE associated Golgi protein. | 0.752 |
Alfi_0595 | Alfi_0596 | PFAM: Acetyltransferase (GNAT) family. | PFAM: Phage protein Gp37/Gp68. | 0.773 |
Alfi_0596 | Alfi_0593 | PFAM: Phage protein Gp37/Gp68. | Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase family 92; TIGRFAM: alpha-1,2-mannosidase, putative. | 0.521 |
Alfi_0596 | Alfi_0594 | PFAM: Phage protein Gp37/Gp68. | Putative membrane protein; PFAM: SNARE associated Golgi protein. | 0.752 |
Alfi_0596 | Alfi_0595 | PFAM: Phage protein Gp37/Gp68. | PFAM: Acetyltransferase (GNAT) family. | 0.773 |
Alfi_1431 | Alfi_0594 | Putative membrane protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN). | Putative membrane protein; PFAM: SNARE associated Golgi protein. | 0.429 |
Alfi_2986 | Alfi_0594 | Hypothetical protein. | Putative membrane protein; PFAM: SNARE associated Golgi protein. | 0.502 |