STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Alfi_2715Hypothetical protein. (148 aa)    
Predicted Functional Partners:
Alfi_2713
Hypothetical protein.
       0.780
Alfi_2714
Hypothetical protein.
       0.780
Alfi_2716
Hypothetical protein.
       0.780
Alfi_2717
Hypothetical protein.
       0.779
Alfi_2718
PFAM: N-acetylmuramoyl-L-alanine amidase.
       0.779
Alfi_2719
Hypothetical protein.
       0.768
Alfi_2720
Hypothetical protein.
       0.768
Alfi_2721
Hypothetical protein.
       0.768
Alfi_2722
Hypothetical protein.
       0.768
Alfi_2723
Hypothetical protein.
       0.742
Your Current Organism:
Alistipes finegoldii
NCBI taxonomy Id: 679935
Other names: A. finegoldii DSM 17242, Alistipes finegoldii AHN 2437, Alistipes finegoldii CIP 107999, Alistipes finegoldii DSM 17242, Alistipes finegoldii str. DSM 17242, Alistipes finegoldii strain DSM 17242
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.