Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEW04737.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
AEW04736.1
Hypothetical protein.
       0.671
AEW04738.1
KEGG: tmz:Tmz1t_0021 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.668
AEW04739.1
Hypothetical protein; PFAM: Type IV leader peptidase family.
       0.668
AEW04740.1
KEGG: bts:Btus_0359 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.558
AEW04735.1
KEGG: adg:Adeg_0766 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.554
AEW04734.1
Hypothetical protein.
       0.494
Your Current Organism:
Sulfobacillus acidophilus
NCBI taxonomy Id: 679936
Other names: S. acidophilus DSM 10332, Sulfobacillus acidophilus DSM 10332, Sulfobacillus acidophilus NAL, Sulfobacillus acidophilus str. DSM 10332, Sulfobacillus acidophilus strain DSM 10332
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