Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Bcop_0141KEGG: bfr:BF3957 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504105797; PFAM: DoxX. (423 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      0.973
Bcop_0142
Protein of unknown function DUF1599; InterPro IPR011630; KEGG: bvu:BVU_0468 hypothetical protein; PFAM: Domain of unknown function DUF1599; SPTR: Putative uncharacterized protein; IMG reference gene:2504105798; PFAM: Domain of Unknown Function (DUF1599).
 
     0.919
Bcop_0139
Sporulation domain-containing protein; InterPro IPR007730; KEGG: bfs:BF3728 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504105795; PFAM: Sporulation related domain.
 
     0.766
Bcop_1231
Protein of unknown function DUF490; InterPro IPR007452; KEGG: bth:BT_0921 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein; IMG reference gene:2504106935; PFAM: Family of unknown function (DUF490).
  
    0.734
Bcop_0267
KEGG: bth:BT_3446 cell division protein FtsQ; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2504105926.
  
    0.710
Bcop_2192
KEGG: bth:BT_0316 putative hemin receptor; SPTR: Putative hemin receptor; IMG reference gene:2504107913; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.708
Bcop_2399
KEGG: bth:BT_4376 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504108131.
  
     0.697
Bcop_1408
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: bfs:BF2374 putative surface membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative surface membrane protein; IMG reference gene:2504107117; PFAM: Surface antigen.
  
     0.690
Bcop_0049
KEGG: bfs:BF3496 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504105704.
  
     0.676
Bcop_0548
Hypothetical protein; COGs: COG2971 N-acetylglucosamine kinase; KEGG: bfs:BF0382 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106222.
  
     0.668
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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