STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bcop_0200Hypothetical protein; KEGG: bth:BT_3846 peptidyl-prolyl cis-trans isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; IMG reference gene:2504105859; PFAM: PPIC-type PPIASE domain. (493 aa)    
Predicted Functional Partners:
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
   0.793
Bcop_0198
KEGG: bfs:BF3887 hypothetical protein; SPTR: Putative exported protein; IMG reference gene:2504105857.
 
  
 0.788
Bcop_0369
KEGG: bfs:BF0074 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106030.
  
     0.769
Bcop_2381
KEGG: bfs:BF3160 hypothetical protein; SPTR: Putative exported protein; IMG reference gene:2504108113.
  
   
 0.750
Bcop_1028
Putative transcriptional regulator, Crp/Fnr family; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: bth:BT_4300 Crp family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504106730; PFAM: Cyclic nucleotide-binding domain.
  
     0.749
Bcop_1072
KEGG: bfs:BF1390 putative outer membrane protein; SPTR: Putative outer membrane protein; IMG reference gene:2504106774; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.748
Bcop_2007
Histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR019734:IPR003594; KEGG: bfs:BF2281 putative two component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; IMG reference gene:2504107726; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
   0.743
Bcop_1408
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: bfs:BF2374 putative surface membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative surface membrane protein; IMG reference gene:2504107117; PFAM: Surface antigen.
  
 
 0.742
Bcop_0314
Phosphoesterase PA-phosphatase related protein; InterPro IPR000326; KEGG: bfs:BF4354 putative transmembrane protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Putative uncharacterized protein; IMG reference gene:2504105975; PFAM: PAP2 superfamily.
  
     0.731
Bcop_0199
InterPro IPR000297; KEGG: bfs:BF3888 putative exported peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: Putative uncharacterized protein; IMG reference gene:2504105858; PFAM: PPIC-type PPIASE domain.
       0.730
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.