Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bcop_0356 | Bcop_0357 | Transposase mutator type; Required for the transposition of the insertion element. | Succinate CoA transferase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702:IPR017821; KEGG: bfs:BF0025 putative CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: Succinate CoA transferase; IMG reference gene:2504106018; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases. | 0.484 |
Bcop_0356 | Bcop_0358 | Transposase mutator type; Required for the transposition of the insertion element. | KEGG: bfs:BF0026 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106019. | 0.447 |
Bcop_0357 | Bcop_0356 | Succinate CoA transferase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702:IPR017821; KEGG: bfs:BF0025 putative CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: Succinate CoA transferase; IMG reference gene:2504106018; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases. | Transposase mutator type; Required for the transposition of the insertion element. | 0.484 |
Bcop_0357 | Bcop_0358 | Succinate CoA transferase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702:IPR017821; KEGG: bfs:BF0025 putative CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: Succinate CoA transferase; IMG reference gene:2504106018; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases. | KEGG: bfs:BF0026 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106019. | 0.705 |
Bcop_0358 | Bcop_0356 | KEGG: bfs:BF0026 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106019. | Transposase mutator type; Required for the transposition of the insertion element. | 0.447 |
Bcop_0358 | Bcop_0357 | KEGG: bfs:BF0026 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106019. | Succinate CoA transferase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702:IPR017821; KEGG: bfs:BF0025 putative CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: Succinate CoA transferase; IMG reference gene:2504106018; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases. | 0.705 |