Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Bcop_0643TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: bfs:BF0565 putative TonB-dependent transmembrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504106322; PFAM: TonB-dependent Receptor Plug Domain. (739 aa)    
Predicted Functional Partners:
Bcop_0642
COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: bfr:BF0614 putative membrane transporter involved in nicotinamide mononucleotide transport; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Putative uncharacterized protein; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; IMG reference gene:2504106321; PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC.
 
  
 0.933
Bcop_0641
COGs: COG1564 Thiamine pyrophosphokinase; InterPro IPR007371:IPR006282; KEGG: bth:BT_2397 hypothetical protein; PFAM: Thiamin pyrophosphokinase, catalytic domain; SPTR: Putative uncharacterized protein; TIGRFAM: Thiamin pyrophosphokinase; IMG reference gene:2504106320; PFAM: Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase.
       0.821
Bcop_1454
COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR008756; KEGG: pru:PRU_2128 TonB family protein; PFAM: TonB, C-terminal; Peptidase M56, BlaR1; SPTR: Putative uncharacterized protein; TIGRFAM: TonB, C-terminal; IMG reference gene:2504107165; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
  
   0.597
Bcop_1828
TonB-dependent receptor plug; InterPro IPR011662:IPR012910:IPR000531; KEGG: bth:BT_3310 hypothetical protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SMART: Secretin/TonB, short N-terminal; SPTR: Outer membrane receptor RagA protein; IMG reference gene:2504107544; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.550
Bcop_1508
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_3297 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504107219; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.541
Bcop_0856
KEGG: bth:BT_4472 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106546.
  
     0.536
Bcop_1323
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_5599 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; IMG reference gene:2504107031; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.517
Bcop_0644
COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: bth:BT_2389 putative transport protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative uncharacterized protein; IMG reference gene:2504106323; PFAM: Mechanosensitive ion channel; Conserved TM helix.
       0.507
Bcop_2261
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bfs:BF0506 putative outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane transport/efflux protein; IMG reference gene:2504107982; PFAM: Outer membrane efflux protein.
  
    0.499
Bcop_1626
TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: bvu:BVU_0571 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; IMG reference gene:2504107341; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family.
  
     0.498
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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