STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_0880V-type ATPase 116 kDa subunit; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: bfr:BF2729 V-type ATP synthase subunit I; PFAM: ATPase, V0/A0 complex, 116kDa subunit; SPTR: Putative uncharacterized protein; IMG reference gene:2504106575; PFAM: V-type ATPase 116kDa subunit family; Belongs to the V-ATPase 116 kDa subunit family. (602 aa)    
Predicted Functional Partners:
Bcop_0875
KEGG: bth:BT_1301 ATP synthase subunit E; SPTR: ATP synthase subunit; IMG reference gene:2504106570; PFAM: HrpE protein.
 
 0.999
Bcop_0876
KEGG: bvu:BVU_3566 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106571; PFAM: Protein of unknown function (DUF2764).
 
 0.999
atpA
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
Bcop_0879
COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: bvu:BVU_3563 V-type ATP synthase subunit D; PFAM: ATPase, V1/A1 complex, subunit D; SPTR: V-type ATPase, D subunit; TIGRFAM: ATPase, V1/A1 complex, subunit D; IMG reference gene:2504106574; PFAM: ATP synthase subunit D.
 
 0.999
Bcop_0881
H+transporting two-sector ATPase C subunit; InterPro IPR002379; KEGG: bvu:BVU_3561 V-type ATP synthase subunit K; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: Putative V(Vacuolar)-type Na+-ATP synthase subunit K; IMG reference gene:2504106576; PFAM: ATP synthase subunit C.
 
 0.999
Bcop_2156
InterPro IPR012944; KEGG: cpi:Cpin_0565 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; IMG reference gene:2504107877; PFAM: SusD family.
  
 0.998
atpE
ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.993
Bcop_0883
COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: bth:BT_1293 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; PRIAM: Phosphorylase; SPTR: Maltodextrin phosphorylase; TIGRFAM: Alpha-glucan phosphorylase; IMG reference gene:2504106578; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
  
    0.594
Bcop_0882
Glycogen(starch) synthase; InterPro IPR001296; KEGG: bvu:BVU_3560 glycosyltransferase family alpha-glycosyltransferase; PFAM: Glycosyl transferase, group 1; PRIAM: Glycogen(starch) synthase; SPTR: Putative glycogen synthase; IMG reference gene:2504106577; PFAM: Glycogen synthase.
     
 0.591
Bcop_0479
Calcium-translocating P-type ATPase, PMCA-type; COGs: COG0474 Cation transport ATPase; InterProIPR004014:IPR008250:IPR005834:IPR006068:IPR 006408:IPR001757; KEGG: bvu:BVU_1302 putative transmembrane calcium-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Calcium-transporting ATPase; SMART: ATPase, P-type cation-transporter, N-terminal; SPTR: Calcium-translocating P-type ATPase, PMCA-type; TIGRFAM: ATPase, P-type, calcium-transpo [...]
    
 0.578
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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