Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bcop_0905KEGG: bfs:BF2107 putative transmembrane protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106600. (155 aa)    
Predicted Functional Partners:
Bcop_0906
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: bfs:BF2108 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative acetyltransferase; IMG reference gene:2504106601; PFAM: Acetyltransferase (GNAT) family.
       0.821
recR
Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.810
Bcop_0901
KEGG: bfs:BF2100 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106596.
  
    0.640
engB
GTP-binding protein engB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.640
Bcop_0903
COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: bfr:BF2049 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Sodium:solute symporter family protein; IMG reference gene:2504106598; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.558
Bcop_0900
Protein of unknown function DUF1573; InterPro IPR011467; KEGG: bfs:BF2093 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; IMG reference gene:2504106595; PFAM: Protein of unknown function (DUF1573).
       0.406
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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