STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_0968Peptidoglycan-binding lysin domain protein; InterPro IPR002482:IPR018392; KEGG: bfs:BF2635 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM-repeat proteins and domains; IMG reference gene:2504106669; PFAM: LppC putative lipoprotein; LysM domain. (607 aa)    
Predicted Functional Partners:
Bcop_0967
KEGG: bfs:BF2636 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106668.
 
     0.861
Bcop_0625
CoA-disulfide reductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099:IPR001455:IPR001763; KEGG: bfs:BF0525 putative pyridine nucleotide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; SirA-like; PRIAM: CoA-disulfide reductase; SMART: Rhodanese-like; SPTR: Pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2504106303; PFAM: Pyridine nucleotide-disulphide oxidoreductase; SirA-like protein; Pyridine nucleotide-disulphide oxidoreductase, dimerisati [...]
  
 
 0.809
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.803
Bcop_1794
Hypothetical protein; KEGG: cbe:Cbei_4376 YD repeat-containing protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107510.
  
 
  0.795
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
  0.780
Bcop_2424
KEGG: bth:BT_4341 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504108156.
  
     0.750
Bcop_2407
KEGG: bfs:BF0991 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504108139.
  
  
  0.748
Bcop_2318
Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.732
Bcop_0072
KEGG: bfs:BF3529 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504105727.
  
     0.725
Bcop_0599
KEGG: bfs:BF0451 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106273.
  
     0.725
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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