STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_1021Sporulation domain-containing protein; InterPro IPR007730; KEGG: bfs:BF2384 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative membrane protein; IMG reference gene:2504106723; PFAM: Sporulation related domain. (358 aa)    
Predicted Functional Partners:
Bcop_1020
Forkhead-associated protein; InterPro IPR000253; KEGG: bvu:BVU_3152 hypothetical protein; PFAM: Forkhead-associated (FHA) domain; SPTR: FHA domain protein; IMG reference gene:2504106722; PFAM: FHA domain.
       0.844
Bcop_2398
KEGG: bfs:BF1000 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504108130.
  
     0.700
Bcop_1565
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: bth:BT_0890 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative DNA-binding protein; IMG reference gene:2504107280; PFAM: Helix-turn-helix.
  
     0.695
Bcop_0267
KEGG: bth:BT_3446 cell division protein FtsQ; SPTR: Putative uncharacterized protein; manually curated; IMG reference gene:2504105926.
  
 
 
 0.656
Bcop_0690
KEGG: bth:BT_3980 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106371.
  
    0.648
Bcop_1147
KEGG: bfs:BF1947 hypothetical protein; SPTR: Putative outer membrane protein; IMG reference gene:2504106850.
  
     0.615
Bcop_2365
YbbR family protein; InterPro IPR012505; KEGG: bth:BT_4593 hypothetical protein; PFAM: YbbR-like; SPTR: Putative uncharacterized protein; IMG reference gene:2504108097; PFAM: YbbR-like protein.
  
    0.604
Bcop_1019
KEGG: bfs:BF2824 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106721.
 
     0.594
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.578
Bcop_1128
Conserved hypothetical protein CHP01319, GlmL; InterPro IPR006230; KEGG: drm:Dred_2691 glutamate mutase, MutL; SPTR: DNA mismatch repair protein mutL; TIGRFAM: Conserved hypothetical protein CHP01319, GlmL; IMG reference gene:2504106831; TIGRFAM: conserved hypothetical protein.
   
 
 0.578
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.