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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_1069Hypothetical protein; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: bfs:BF1384 hypothetical protein; SPTR: Putative metal dependent hydrolase; IMG reference gene:2504106771. (243 aa)    
Predicted Functional Partners:
Bcop_1067
Glyoxalase/bleomycin resistance protein/dioxygenase; InterPro IPR004360; KEGG: bfs:BF1382 putative lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Lactoylglutathione lyase; IMG reference gene:2504106769; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
    0.931
Bcop_1068
KEGG: bth:BT_1579 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106770.
  
    0.789
pdxH
Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
       0.722
Bcop_0561
GCN5-related N-acetyltransferase; COGs: COG4552 acetyltransferase involved in intracellular survival and related acetyltransferase; InterPro IPR000182; KEGG: bfr:BF0471 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, GNAT family; IMG reference gene:2504106235; PFAM: Acetyltransferase (GNAT) family.
  
     0.693
Bcop_0562
COGs: COG4866 conserved hypothetical protein; KEGG: bth:BT_3689 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504106236; PFAM: Uncharacterized conserved protein (DUF2156).
  
    0.675
Bcop_1071
COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: bfs:BF1389 D-lactate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: D-lactate dehydrogenase; SPTR: Putative uncharacterized protein; IMG reference gene:2504106773; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
       0.642
Bcop_1072
KEGG: bfs:BF1390 putative outer membrane protein; SPTR: Putative outer membrane protein; IMG reference gene:2504106774; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX).
       0.467
Bcop_2384
KEGG: bfr:BF3327 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504108116.
  
     0.452
Bcop_0072
KEGG: bfs:BF3529 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504105727.
  
     0.436
Bcop_2168
Sporulation domain-containing protein; InterPro IPR007730; KEGG: bfs:BF1670 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; IMG reference gene:2504107889; PFAM: Sporulation related domain.
  
     0.423
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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