STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_1257Hypothetical protein; KEGG: lsa:LSA0347 L-asparaginase; SPTR: L-asparaginase; IMG reference gene:2504106963. (119 aa)    
Predicted Functional Partners:
Bcop_1258
TQO small subunit DoxD domain-containing protein; InterPro IPR007301:IPR011636; KEGG: bth:BT_0515 terminal quinol oxidase, subunit, putative (DoxD-like); PFAM: TQO small subunit DoxD; TQO small subunit DoxA; SPTR: Quinol oxidase subunit; IMG reference gene:2504106964; PFAM: TQO small subunit DoxD; TQO small subunit DoxA.
       0.543
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.