STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Bcop_1559ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: bfs:BF2504 putative magnesium chelatase; PFAM: ATPase, AAA-3; SPTR: Magnesium chelatase subunit I; IMG reference gene:2504107274; PFAM: ATPase family associated with various cellular activities (AAA). (331 aa)    
Predicted Functional Partners:
Bcop_1558
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: bfs:BF2503 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein; IMG reference gene:2504107273; PFAM: Protein of unknown function DUF58.
  
 0.960
Bcop_1556
Von Willebrand factor type A; InterPro IPR002035; KEGG: bfs:BF2501 aerotolerance-related membrane protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein; IMG reference gene:2504107271; PFAM: von Willebrand factor type A domain.
 
 
 0.938
Bcop_1555
Von Willebrand factor type A; InterPro IPR002035; KEGG: bfr:BF2418 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: BatB; IMG reference gene:2504107270; PFAM: von Willebrand factor type A domain.
 
 
 0.924
Bcop_1557
KEGG: bfs:BF2502 putative membrane exported protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107272.
 
    0.770
Bcop_1554
InterPro IPR001440:IPR019734; KEGG: bth:BT_0905 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; IMG reference gene:2504107269; PFAM: Tetratricopeptide repeat.
 
     0.735
Bcop_1553
KEGG: bth:BT_0904 hypothetical protein; SPTR: BatD family protein; IMG reference gene:2504107268.
 
   
 0.692
Bcop_1552
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440:IPR013247:IPR019734:IPR003646; KEGG: bth:BT_0903 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SH3, type 3; SMART: Tetratricopeptide repeat; SH3-like domain, bacterial; SPTR: Aerotolerance-related exported protein; IMG reference gene:2504107267; PFAM: Tetratricopeptide repeat; Bacterial SH3 domain.
 
     0.627
Bcop_1551
KEGG: bth:BT_0902 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107266.
       0.458
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.458
Bcop_0008
Malic protein NAD-binding; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: bth:BT_1969 malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SMART: Malic enzyme, NAD-binding; SPTR: NADP-dependent malic enzyme; IMG reference gene:2504105663; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
  
    0.430
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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