STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_1767Conserved hypothetical protein CHP02688; COGs: COG4930 ATP-dependent Lon-type protease; InterPro IPR014061; KEGG: dvu:DVU2019 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02688; IMG reference gene:2504107483; TIGRFAM: TIGR02688 family protein; conserved hypothetical protein. (683 aa)    
Predicted Functional Partners:
Bcop_1770
KEGG: cyh:Cyan8802_2210 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107486.
 
  
 0.988
Bcop_1769
KEGG: cpb:Cphamn1_1677 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107485.
 
  
 0.983
Bcop_1771
Protein of unknown function DUF1788; InterPro IPR014858; KEGG: rsq:Rsph17025_3735 hypothetical protein; PFAM: Protein of unknown function DUF1788; SPTR: Putative uncharacterized protein; IMG reference gene:2504107487; PFAM: Domain of unknown function (DUF1788).
 
    0.967
Bcop_1768
Conserved hypothetical protein CHP02687; InterPro IPR014060:IPR013973; KEGG: cpb:Cphamn1_1676 PglZ domain protein; PFAM: PglZ domain; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02687; IMG reference gene:2504107484; PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein.
 
     0.954
Bcop_1772
InterPro IPR014948; KEGG: maq:Maqu_0555 hypothetical protein; PFAM: Protein of unknown function DUF1819, putative inner membrane; SPTR: Putative uncharacterized protein; IMG reference gene:2504107488; PFAM: Putative inner membrane protein (DUF1819).
 
     0.945
Bcop_1846
COGs: COG1106 ATPase; KEGG: cat:CA2559_11638 abortive infection protein, putative; SPTR: Abortive infection protein, putative; IMG reference gene:2504107562.
  
  
 0.678
Bcop_2126
KEGG: pmz:HMPREF0659_A7225 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107847; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.628
Bcop_0005
Hypothetical protein; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: bfs:BF0812 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504105660.
  
    0.554
Bcop_1598
Putative DNA helicase; COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: bth:BT_4344 putative DNA helicase; SPTR: Putative uncharacterized protein; IMG reference gene:2504107313; PFAM: Protein of unknown function (DUF3320).
  
    0.554
Bcop_1542
COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR004546:IPR003356; KEGG: fjo:Fjoh_4393 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Type I restriction-modification system, M subunit; TIGRFAM: Restriction endonuclease, type I, EcoRI, M subunit; IMG reference gene:2504107257; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
  
    0.428
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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