STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_1945Hypothetical protein; KEGG: pfh:PFHG_01544 conserved hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107661. (260 aa)    
Predicted Functional Partners:
Bcop_1944
Hypothetical protein; KEGG: ddi:DDB_G0273517 actin binding protein E; SPTR: Putative uncharacterized protein; IMG reference gene:2504107660.
       0.773
Bcop_1946
KEGG: pdi:BDI_2707 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107662.
       0.447
Bcop_1947
KEGG: ptm:GSPATT00012657001 hypothetical protein; SPTR: Chromosome undetermined scaffold_35, whole genome shotgun sequence; IMG reference gene:2504107663.
       0.447
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.