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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bcop_2012Hypothetical protein; KEGG: bfr:BF3031 putative cell wall biogenesis protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107731. (707 aa)    
Predicted Functional Partners:
Bcop_2011
KEGG: bfr:BF3032 putative cell surface protein; SPTR: Putative lipoprotein; IMG reference gene:2504107730.
  
    0.820
Bcop_2009
TonB-dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: pru:PRU_2506 outer membrane receptor (OMR) family transporter; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; IMG reference gene:2504107728; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
   0.777
Bcop_2013
Hypothetical protein; KEGG: bfr:BF3031 putative cell wall biogenesis protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107732.
      
0.773
Bcop_2010
KEGG: cpi:Cpin_3942 hypothetical protein; SPTR: Putative lipoprotein; IMG reference gene:2504107729.
   
   0.745
Bcop_0028
Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: bfr:BF1033 FtsK/SpoIIIE family cell division protein; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; SPTR: Putative uncharacterized protein; IMG reference gene:2504105683; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
    
   0.470
Bcop_1342
KEGG: bvu:BVU_1378 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504107051.
   
 0.450
Bcop_0168
Peptidase S8 and S53 subtilisin kexin sedolisin; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: bth:BT_3889 subtilisin-like serine protease; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; SPTR: Putative uncharacterized protein; IMG reference gene:2504105824; PFAM: Subtilase family; Belongs to the peptidase S8 family.
   
  0.434
Bcop_1925
Hypothetical protein; KEGG: bcb:BCB4264_A1654 conserved repeat domain protein; SPTR: Cell surface protein; IMG reference gene:2504107641.
   
  0.434
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.425
Bcop_2347
KEGG: pmr:PMI2910 acyl carrier protein; SPTR: Putative acyl carrier protein; IMG reference gene:2504108078.
   
   0.425
Your Current Organism:
Bacteroides coprosuis
NCBI taxonomy Id: 679937
Other names: B. coprosuis DSM 18011, Bacteroides coprosuis DSM 18011, Bacteroides coprosuis PC139, Bacteroides coprosuis str. DSM 18011, Bacteroides coprosuis strain DSM 18011
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